Running Enviroment

Envoriment

• ubuntu 16.04.10

• Python 3.5.2

• Pytorch 1.5.1+cu101

Docker file

We provide a docker image for running this source code:

# get docker file
docker pull yaozhong/ont_methylation:0.6
# get into the docker enviroment
nvidia-docker run -it --shm-size=64G -v LOCAL_DATA_PATH:MOUNT_DATA_PATH yaozhong/ont_methylation:0.6